Targeted Quantitation

Established Methods for Common and General Metabolites

Amino Acids

  • Amino Acid:
    Tryptophan/ Phenylalanine/ Isoleucine/ Leucine/ Methionine/ Tyrosine/ Valine/ Proline/ Cysteine/ Alanine/ Glutamate/ Threonine/ Homocysteine/ Glycine/ Glutamine/ Serine/ Asparagine/ Aspartate/ Sarcosine/ Arginine/ Histidine/ Lysine/ Cystine / Homocysteine/ Sarcosine/ S-solfocysteine
  • Polyamine:
    Spermidine/ Spermine/ Putrescine/ Ethanolamine/ Diaminohexane/ Cadaverine/ 1,3-Diaminopropane/ N1-Acetylspermidine/ N1,N12-Diacetylspermine/ N-Acetylputrescine/ N1,N8-Diacetylspermidine

Carbohydrates

  • Glycolysis:
    Glucose/ G6P/ F6P/ F1,6BP/ GADP/DHAP/3PG/2PG/ PEP/ Pyruvate/ Lactate/ Gln6P
  • TCA cycle:
    Acetyl-CoA/ Citrate/ Aconitate/ Isocitrate/ α-KG/ Succinyl-CoA/ Succinate/ Fumarate/ Malate/ OAA
  • Pentose Phosphate Pathway:
    R5P/E4P/ S7P/ G3P/ Ru5P/ X5P/ RuBP/ G1P

Cofactors and Vitamins

  • Vitamin:
    B1/B2/B3/B4/B5/Pyridoxal/Pyridoxine/B7/B9/B12/ Choline/ B10/ TMP/ TPP/ C/ FAD/ FMN
  • Cofactor:
    AMP/NADPH/ NADP+/ CoA/ NADH/ NAD+

Energy

  • ADP/ATP

Lipids

  • Fatty Acids
  • Phospholipids
  • Steroids:
    Testosterone/1-Dehydrotestosteraone/ Androstenedione/ Boldione/ 4-BNC/ 25-Hydroxycholesterol/ Cholesterol/ Progesterone/ Lanosterol/ Cortisol/ Estradiol
  • Prostaglandin:
    PGF2a/ PGE2/ 15 keto PGF2a/ 15 Keto PGE2/ 13,14-DiH 15 PGF2a/ 13,14-DiH15 ketoPGE2/ Leukotriene B4/ 15d PGJ2/ 5 HEPE/ 13 HODE/ 9 HODE/ 15S HETE/ 13 OxoODE/ 15 OxoETE/ 9 oxoODE/ 5 HETE/ 4 HDHA/ 5 oxoETE/ Linoleic acid/ NAGly
  • Fatty Acyl Carnitine:
    Decanoyl carnitine/Lauroyl carnitine/Myristoyl carnitine/ Linoleoyl carnitine/ Palmitoyl carnitine/ Oleoyl carnitine/ Stearyoyl carnitine/ Octanoyl carnitine/Hexanoyl carnitine/Isovaleryl carnitine/Butyryl carnitine/Propionyl carnitine/Acetyl carnitine/ Carnitine
  • Fatty Acyl CoA:
    Palmitoleoyl CoA/Palmitoyl CoA/Linoleoyl CoA/Oleoyl CoA/Stearoyl CoA/Arachidonoyl CoA
  • Short Chain Fatty Acid:
    Butyric acid/Valeric acid/Phenylacetic acid/Heptanoic acid/ Sphingosine/ Ceramide/ Sphingomyelin
  • Cholesterol Synthesis :
    Acetoacetyl-CoA/ Mevalonate/ HMG-CoA/ Lanosterol/ Cholesterol/Desmosterol/Squalene

Nucleotides

  • Nucleotide Sugar:
    UDP-glucose/ ADP-glucose/ UDP-GlcNAc/ GDP-Glc-NAc
  • Nucleotide:
    ATP/CTP/GTP/UTP/dGTP/dATP/dCTP/dUTP
  • Nucleobase:
    Adenine/ Thymine/ Cycosine/ Guanine/ Methylcytosine
  • Signal Molecules:
    cAMP/ cGMP/ c-di-AMP/ c-di GMP

Established Methods for Plant Metabolites

  • Carotenes:
    Carotene/ Astaxanthin/ Canthaxannthin/ Zeaxanthin/ Lutein
  • Coumarins:
    Scopoletin/ Fraxetin/ Esculetin/ Esculin/ 4-Methyl-umbelliferone
  • Cytokinins:
    Zeantin/ 6-Dimethylallyamino-purine/ Zeantin riboside/ Thidiazuron/ Kinetin
  • Flavonoids:
    Apigenin/ Luteolin/ Wedelolactone/ Quercetin/ Kaempferol
  • Ginsenosides:
    3Rg3/ CK/ Rh2
  • Glucosinolates:
    4MSOB/ 5MSOP/ 6MSOH/ 7MSOH/ 8MSOO/ 4MTB
  • Nicotines:
    Nicotine/ Nornicotine/ Anabasine/ Anatabine
  • Phytohormones:
    SA/ IAA/ ABA/ JA/ JA-Ile/ GA3/ MeJA
  • Phytosiderophores:
    NA/ DMA/ HDMA/ HMA/ AVA/ HAVACytokinins